Launching Galaxy / Alveo
You can access the Galaxy server from the link in the menu bar on the Alveo site, or just enter the URL http://galaxy.alveo.edu.au/ directly.
To work with Alveo data on Galaxy, use the Alveo tools to transfer item lists and documents to the Galaxy server. The main tools you will need to use are:
- Store Alveo API Key – stores your API key so that other tools can use it
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Import Item List Names Retrieves the list of Item Lists from Alveo
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Get Item URLs for Item List Retrieves Item URLs from an Alveo Item List
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Get Alveo Data for Items Downloads files from the items in an Galaxy list of items
The following video shows how to use these tools to get a set of files uploaded to Galaxy.
Galaxy Operation Basics
Mostly, Galaxy operation is out of scope for this Help. However, there are a few simple tips included here to get you started.
To see Galaxy’s own Help pages… | Accessing the Galaxy Help |
To see some basic operation instructions for the main Galaxy screen… | Getting Started with Galaxy |
To see a quick guide to creating a Galaxy workflow… | Galaxy Workflows |
To see instructions for loading data files into Galaxy / Alveo directly from your computer… | Uploading Data Files from Your Computer |